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Intron Name: Anas_platyrhynchos_platyrhynchos_16_7592767_7593934_F

Intron Information:

Intron Rank:

Intron Class:

major_hybrid

Intron Phase:

Intron Coordinates:

7592767 - 7593934

Intron Length:

1168

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATGTCT

5'SS Class:

strong_major

3'SS Sequence:

AAATTGGACCTAG|G

3'SS Class:

major_hybrid

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TTTTTTTTAAAT

Flanking Amino Acid:

IQELQEKLTKAVKASSEATE

Intron Amino Acid Position:

650

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

35.5

Major BPS

90.4

0.7

90.2

19.3

Major PPT

49.9

-0

40.4

43.1

Minor 5ss

39.4

-1.2

3.3

57.2

Minor BPS

79.5

1.2

92.62

Associated Gene:

Gene:

CIT

Ensembl Gene ID:

ENSAPLG00000009657

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045146

7562782 - 7633442

70661

ENSAPLT00000022538

7562782 - 7633898

71117

ENSAPLT00000010123

7562782 - 7633898

71117