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Intron Name: Anas_platyrhynchos_platyrhynchos_16_7615613_7616087_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

7615613 - 7616087

Intron Length:

475

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCTTTTCT

5'SS Class:

weak_major

3'SS Sequence:

CATTTTAATGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TCCATTTTAATG

Flanking Amino Acid:

QRMLDTEKQSRVRADQRITE

Intron Amino Acid Position:

1119

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.33

1.3

66.9

39.1

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

76.1

0.59

70.8

38.5

Minor 5ss

44.4

-0.6

2.5

60.5

43.8

Minor BPS

56.1

0.05

1.4

54.53

41.8

Associated Gene:

Gene:

CIT

Ensembl Gene ID:

ENSAPLG00000009657

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045146

7562782 - 7633442

70661

ENSAPLT00000022538

7562782 - 7633898

71117

ENSAPLT00000010123

7562782 - 7633898

71117