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Intron Name: Anas_platyrhynchos_platyrhynchos_16_7627044_7627905_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7627044 - 7627905

Intron Length:

862

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGATAG

5'SS Class:

strong_major

3'SS Sequence:

AACTTCCCTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTAAA

U12 Branch Point Sequence:

CCACCCTAAACC

Flanking Amino Acid:

KGCHLFAAGKVENGLCICAA

Intron Amino Acid Position:

1725

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

68.6

39.1

Major BPS

62.9

0.32

1.2

65.3

38.6

Major PPT

73.9

0.54

0.9

66.1

Minor 5ss

35.9

-1.6

3.3

46.1

49.1

Minor BPS

54.9

0.13

1.8

60.37

44.7

Associated Gene:

Gene:

CIT

Ensembl Gene ID:

ENSAPLG00000009657

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022538

7562782 - 7633898

71117

ENSAPLT00000010123

7562782 - 7633898

71117

ENSAPLT00000045146

7562782 - 7633442

70661