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Intron Name: Anas_platyrhynchos_platyrhynchos_16_7633377_7633874_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7633377 - 7633874

Intron Length:

498

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTCAG

5'SS Class:

strong_major

3'SS Sequence:

ATTTCCCTGCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTTAT

U12 Branch Point Sequence:

GCAACGTTAACT

Flanking Amino Acid:

ARTPLAQVNKVWDQSSV*

Intron Amino Acid Position:

2050

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.6

1.03

0.8

77.9

38.6

Major BPS

87.7

0.94

0.8

77.7

36.7

Major PPT

73.7

0.53

66.7

Minor 5ss

33.6

-1.9

2.9

40.4

45.7

Minor BPS

54.1

0.21

2.1

70.47

45.8

Associated Gene:

Gene:

CIT

Ensembl Gene ID:

ENSAPLG00000009657

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022538

7562782 - 7633898

71117

ENSAPLT00000010123

7562782 - 7633898

71117