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Intron Name: Anas_platyrhynchos_platyrhynchos_16_7838383_7841663_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7838383 - 7841663

Intron Length:

3281

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGTGGC

5'SS Class:

strong_major

3'SS Sequence:

CTCCTTTATGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCTTTAT

U12 Branch Point Sequence:

CTCTCCTTTATG

Flanking Amino Acid:

CVISSVGANEIWVRKTSDST

Intron Amino Acid Position:

306

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.4

0.81

73.2

37.5

Major BPS

71.5

0.54

1.1

63.3

42.8

Major PPT

80.5

0.69

0.8

76.3

31.2

Minor 5ss

31.6

-2.1

3.4

43.4

44.3

Minor BPS

60.6

0.19

1.8

62.9

45.4

Associated Gene:

Gene:

SUDS3

Ensembl Gene ID:

ENSAPLG00000008727

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009112

7838284 - 7858821

20538