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Intron Name: Anas_platyrhynchos_platyrhynchos_16_7931965_7938209_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7931965 - 7938209

Intron Length:

6245

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTCCT

5'SS Class:

strong_major

3'SS Sequence:

TCCATTTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTGTTTTTATCC

Flanking Amino Acid:

NSTSSVVHKKDHVFIRDEVG

Intron Amino Acid Position:

399

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.2

0.88

0.9

77.1

37.8

Major BPS

96.5

1.15

0.6

34.2

Major PPT

81.6

0.71

0.8

76.4

32.1

Minor 5ss

42.9

-0.8

2.8

59.8

44.7

Minor BPS

64.6

0.44

1.6

73.19

38.5

Associated Gene:

Gene:

TAOK3

Ensembl Gene ID:

ENSAPLG00000012433

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013041

7867014 - 7952449

85436