Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_16_7946405_7947710_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7946405 - 7947710

Intron Length:

1306

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GAG|GCAAGAAGC

5'SS Class:

strong_major

3'SS Sequence:

TGTATGCATGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAC

U12 Branch Point Sequence:

GTTTTTTTGACT

Flanking Amino Acid:

YKLCKEKIKEEMNEDHSTPK

Intron Amino Acid Position:

566

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.5

1.03

0.9

82.3

33.6

Major BPS

86.5

0.91

0.8

77.4

37.4

Major PPT

69.7

0.44

62.8

43.2

Minor 5ss

23.5

-3.1

3.7

34.6

41.3

Minor BPS

76.2

0.91

1.1

87.13

Associated Gene:

Gene:

TAOK3

Ensembl Gene ID:

ENSAPLG00000012433

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043988

7867014 - 7952449

85436

ENSAPLT00000013041

7867014 - 7952449

85436