Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_16_7952166_7952287_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7952166 - 7952287

Intron Length:

122

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGCACC

5'SS Class:

major

3'SS Sequence:

GTGCTTCTTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTGAG

U12 Branch Point Sequence:

CATGCCCTGAGG

Flanking Amino Acid:

SLRRAHLEQKIEEELAALQK

Intron Amino Acid Position:

846

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.9

0.71

69.7

41.3

Major BPS

-0.1

1.5

42.6

40.4

Major PPT

79.3

0.66

0.9

73.2

37.2

Minor 5ss

39.3

-1.2

3.1

52.3

44.6

Minor BPS

43.8

-0.6

2.1

47.86

45.5

Associated Gene:

Gene:

TAOK3

Ensembl Gene ID:

ENSAPLG00000012433

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043988

7867014 - 7952449

85436

ENSAPLT00000013041

7867014 - 7952449

85436