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Intron Name: Anas_platyrhynchos_platyrhynchos_16_7955675_7956107_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7955675 - 7956107

Intron Length:

433

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGTACC

5'SS Class:

strong_major

3'SS Sequence:

CTCCTCCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACTGCAA

U12 Branch Point Sequence:

TGTCTCCTCCCC

Flanking Amino Acid:

YVGSGPPKGTGLHRYVWLVY

Intron Amino Acid Position:

269

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.7

0.75

1.2

78.8

35.5

Major BPS

47.8

-0.1

1.3

57.3

39.4

Major PPT

74.8

0.56

0.7

24.8

Minor 5ss

32.4

-2

2.5

38.4

39.2

Minor BPS

34.2

-1.2

3.5

56.77

41.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017386

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019420

7955457 - 7957780

2324