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Intron Name: Anas_platyrhynchos_platyrhynchos_16_7998530_8000554_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7998530 - 8000554

Intron Length:

2025

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCCCT

5'SS Class:

strong_major

3'SS Sequence:

CCTATTGCTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATTAC

U12 Branch Point Sequence:

TTCTCCTTATTA

Flanking Amino Acid:

NYQEAAIYLQEGENNDKFFT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.3

0.81

0.9

71.4

40.3

Major BPS

74.8

0.62

1.1

40.5

Major PPT

70.2

0.45

0.9

61.7

39.9

Minor 5ss

35.1

-1.7

3.1

48.4

47.3

Minor BPS

72.1

0.69

1.5

78.93

38.2

Associated Gene:

Gene:

TPCN1

Ensembl Gene ID:

ENSAPLG00000013723

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039351

7994888 - 8020870

25983

ENSAPLT00000014352

7991252 - 8020870

29619