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Intron Name: Anas_platyrhynchos_platyrhynchos_16_8002845_8003429_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8002845 - 8003429

Intron Length:

585

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGTTGT

5'SS Class:

strong_major

3'SS Sequence:

CGTTTTCTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTCAC

U12 Branch Point Sequence:

GTCTTCTCACCT

Flanking Amino Acid:

LFFMVIFAILGFYLFSPNHS

Intron Amino Acid Position:

238

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.6

0.77

0.9

74.8

38.1

Major BPS

0.87

0.8

85.6

Major PPT

81.1

0.7

0.8

73.6

Minor 5ss

-1.6

2.9

40.9

45.4

Minor BPS

53.3

0.18

1.9

72.31

44.6

Associated Gene:

Gene:

TPCN1

Ensembl Gene ID:

ENSAPLG00000013723

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039351

7994888 - 8020870

25983

ENSAPLT00000014352

7991252 - 8020870

29619