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Intron Name: Anas_platyrhynchos_platyrhynchos_16_8003465_8004124_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8003465 - 8004124

Intron Length:

660

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTAAGCATC

5'SS Class:

strong_major

3'SS Sequence:

CCTTTTCTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTCAT

U12 Branch Point Sequence:

TTGTCATTTATT

Flanking Amino Acid:

YLFSPNHSDPYFSTLENSLV

Intron Amino Acid Position:

250

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.5

0.77

76.5

39.2

Major BPS

84.8

0.86

1.1

85.7

34.9

Major PPT

89.8

0.89

0.6

Minor 5ss

44.4

-0.6

2.9

42.6

Minor BPS

60.6

0.41

1.9

81.12

40.6

Associated Gene:

Gene:

TPCN1

Ensembl Gene ID:

ENSAPLG00000013723

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014352

7991252 - 8020870

29619

ENSAPLT00000039351

7994888 - 8020870

25983