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Intron Name: Anas_platyrhynchos_platyrhynchos_16_8004184_8004960_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8004184 - 8004960

Intron Length:

777

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTTCT

5'SS Class:

strong_major

3'SS Sequence:

CTTTCGGATGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTAAAT

U12 Branch Point Sequence:

AGGCACTTAAAT

Flanking Amino Acid:

VNLFVLLTTSNFPDVMMPSY

Intron Amino Acid Position:

269

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.1

0.87

0.9

84.2

27.2

Major BPS

0.5

1.1

76.9

32.8

Major PPT

71.7

0.49

65.6

40.1

Minor 5ss

44.5

-0.6

2.8

38.4

Minor BPS

0.2

1.7

67.68

Associated Gene:

Gene:

TPCN1

Ensembl Gene ID:

ENSAPLG00000013723

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039351

7994888 - 8020870

25983

ENSAPLT00000014352

7991252 - 8020870

29619