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Intron Name: Anas_platyrhynchos_platyrhynchos_16_8005061_8006084_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8005061 - 8006084

Intron Length:

1024

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTGAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

CTTCTTTCCGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTCTCAT

U12 Branch Point Sequence:

TGTGTCTCATCT

Flanking Amino Acid:

SIELYFIMNLLLAVVFDTFN

Intron Amino Acid Position:

303

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

0.9

71.1

32.7

Major BPS

77.2

0.67

1.2

79.6

35.6

Major PPT

84.3

0.77

0.7

80.2

25.1

Minor 5ss

28.6

-2.4

32.8

35.9

Minor BPS

49.9

0.08

1.9

72.47

44.4

Associated Gene:

Gene:

TPCN1

Ensembl Gene ID:

ENSAPLG00000013723

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039351

7994888 - 8020870

25983

ENSAPLT00000014352

7991252 - 8020870

29619