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Intron Name: Anas_platyrhynchos_platyrhynchos_16_8006202_8007089_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8006202 - 8007089

Intron Length:

888

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACAGCGC

5'SS Class:

major

3'SS Sequence:

CCTTGTTTTCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTCAT

U12 Branch Point Sequence:

TGCTCATGACAT

Flanking Amino Acid:

HAYRLLITKQRPSGISFKHF

Intron Amino Acid Position:

342

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.6

0.42

1.1

52.2

44.9

Major BPS

79.7

0.74

79.6

35.6

Major PPT

80.2

0.68

0.8

72.6

37.6

Minor 5ss

29.4

-2.4

3.5

44.8

Minor BPS

-0.3

64.38

45.1

Associated Gene:

Gene:

TPCN1

Ensembl Gene ID:

ENSAPLG00000013723

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039351

7994888 - 8020870

25983

ENSAPLT00000014352

7991252 - 8020870

29619