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Intron Name: Anas_platyrhynchos_platyrhynchos_16_8007215_8008164_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8007215 - 8008164

Intron Length:

950

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGATGC

5'SS Class:

strong_major

3'SS Sequence:

TTTTGTTTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTGAT

U12 Branch Point Sequence:

AGGCTCTGATCA

Flanking Amino Acid:

ALNQSNTPLLSLKDFYNFYE

Intron Amino Acid Position:

383

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

66.9

Major BPS

0.72

38.9

Major PPT

92.6

0.96

0.7

88.3

28.9

Minor 5ss

36.9

-1.5

3.3

50.4

46.2

Minor BPS

46.1

-0.2

1.7

52.78

38.8

Associated Gene:

Gene:

TPCN1

Ensembl Gene ID:

ENSAPLG00000013723

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039351

7994888 - 8020870

25983

ENSAPLT00000014352

7991252 - 8020870

29619