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Intron Name: Anas_platyrhynchos_platyrhynchos_16_8008214_8008407_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8008214 - 8008407

Intron Length:

194

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTATT

5'SS Class:

strong_major

3'SS Sequence:

GTTCTGCTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

CTTCTTTTGATT

Flanking Amino Acid:

FYEVVGLKWKAKRNREHWFD

Intron Amino Acid Position:

400

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

95.7

1.08

0.6

12.4

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

79.1

0.66

0.9

69.5

41.7

Minor 5ss

36.2

-1.6

2.9

50.6

45.9

Minor BPS

62.7

0.48

1.2

75.19

36.2

Associated Gene:

Gene:

TPCN1

Ensembl Gene ID:

ENSAPLG00000013723

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039351

7994888 - 8020870

25983

ENSAPLT00000014352

7991252 - 8020870

29619