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Intron Name: Anas_platyrhynchos_platyrhynchos_16_8010681_8011364_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8010681 - 8011364

Intron Length:

684

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTAGG

5'SS Class:

strong_major

3'SS Sequence:

TCTCCTTTTACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTCAT

U12 Branch Point Sequence:

TCTCCTTTTACA

Flanking Amino Acid:

VPWSYIVFLTIYGVELLLKT

Intron Amino Acid Position:

473

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.82

0.9

75.5

40.6

Major BPS

82.6

0.81

0.9

83.3

27.7

Major PPT

88.3

0.86

0.7

25.5

Minor 5ss

36.8

-1.5

2.7

42.8

38.2

Minor BPS

63.8

0.43

1.6

72.64

39.2

Associated Gene:

Gene:

TPCN1

Ensembl Gene ID:

ENSAPLG00000013723

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039351

7994888 - 8020870

25983

ENSAPLT00000014352

7991252 - 8020870

29619