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Intron Name: Anas_platyrhynchos_platyrhynchos_16_8011438_8011640_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8011438 - 8011640

Intron Length:

203

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCT|GTAAGTGTG

5'SS Class:

major

3'SS Sequence:

TTTTCTTTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATATCAT

U12 Branch Point Sequence:

ATGTCATTTATT

Flanking Amino Acid:

PVEYLSSGWNLFDFSVTLFA

Intron Amino Acid Position:

497

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.7

0.58

1.1

69.5

41.3

Major BPS

79.4

0.73

80.1

Major PPT

1.01

0.6

88.4

28.7

Minor 5ss

39.2

-1.2

3.4

59.1

45.3

Minor BPS

55.9

0.27

1.9

75.36

41.7

Associated Gene:

Gene:

TPCN1

Ensembl Gene ID:

ENSAPLG00000013723

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039351

7994888 - 8020870

25983

ENSAPLT00000014352

7991252 - 8020870

29619