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Intron Name: Anas_platyrhynchos_platyrhynchos_16_8011749_8012979_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8011749 - 8012979

Intron Length:

1231

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGACAG

5'SS Class:

strong_major

3'SS Sequence:

CTTCTCCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTCAG

U12 Branch Point Sequence:

CGTAGGTTAACT

Flanking Amino Acid:

IVVLRPLQLLRLFKLKKRYR

Intron Amino Acid Position:

533

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.4

0.81

0.9

67.7

39.3

Major BPS

63.7

0.34

1.6

39.9

Major PPT

87.3

0.84

0.7

84.7

Minor 5ss

25.9

-2.8

2.9

29.3

43.4

Minor BPS

47.2

-0.1

2.5

69.13

47.3

Associated Gene:

Gene:

TPCN1

Ensembl Gene ID:

ENSAPLG00000013723

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014352

7991252 - 8020870

29619

ENSAPLT00000039351

7994888 - 8020870

25983