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Intron Name: Anas_platyrhynchos_platyrhynchos_16_8015569_8016107_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8015569 - 8016107

Intron Length:

539

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

CTGTCTCCTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTGTAT

U12 Branch Point Sequence:

GCACCAGTGACT

Flanking Amino Acid:

TVVNDWYIIMEGVTSQTTHW

Intron Amino Acid Position:

642

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.94

0.8

26.1

Major BPS

59.2

0.23

1.4

61.1

45.5

Major PPT

74.5

0.55

0.8

66.4

35.7

Minor 5ss

35.2

-1.7

2.7

39.2

40.5

Minor BPS

43.7

-0.4

2.2

59.54

43.4

Associated Gene:

Gene:

TPCN1

Ensembl Gene ID:

ENSAPLG00000013723

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039351

7994888 - 8020870

25983

ENSAPLT00000014352

7991252 - 8020870

29619