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Intron Name: Anas_platyrhynchos_platyrhynchos_16_8019139_8020287_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8019139 - 8020287

Intron Length:

1149

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTGGG

5'SS Class:

strong_major

3'SS Sequence:

TCTTGTCTCGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTGAT

U12 Branch Point Sequence:

TCTGTCTTGATC

Flanking Amino Acid:

SMKMYEEEIQEWYEEHSRKE

Intron Amino Acid Position:

766

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

0.9

68.8

42.3

Major BPS

83.8

0.84

73.6

41.8

Major PPT

81.7

0.71

0.8

76.5

32.1

Minor 5ss

38.2

-1.3

3.1

49.2

47.1

Minor BPS

0.39

1.4

68.28

38.4

Associated Gene:

Gene:

TPCN1

Ensembl Gene ID:

ENSAPLG00000013723

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039351

7994888 - 8020870

25983

ENSAPLT00000014352

7991252 - 8020870

29619