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Intron Name: Anas_platyrhynchos_platyrhynchos_16_8292803_8300729_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8292803 - 8300729

Intron Length:

7927

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCAGAGCT

5'SS Class:

major

3'SS Sequence:

TCTCTCCCAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTACCAG

U12 Branch Point Sequence:

TCTCTCCCAACA

Flanking Amino Acid:

SQIYHCTKRKDEECSTTEHP

Intron Amino Acid Position:

344

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.6

0.63

1.3

72.5

37.3

Major BPS

41.8

-0.5

1.6

50.2

43.7

Major PPT

74.9

0.56

0.8

70.1

29.3

Minor 5ss

28.5

-2.5

3.2

40.2

45.4

Minor BPS

49.4

-0

1.9

65.62

40.5

Associated Gene:

Gene:

TBX5

Ensembl Gene ID:

ENSAPLG00000006488

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032077

8292141 - 8417622

125482

ENSAPLT00000006752

8292141 - 8328772

36632