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Intron Name: Anas_platyrhynchos_platyrhynchos_16_8319324_8321443_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8319324 - 8321443

Intron Length:

2120

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTGAGTCCC

5'SS Class:

major

3'SS Sequence:

TCCCCATGCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCCCAT

U12 Branch Point Sequence:

ATTCCCATGAGA

Flanking Amino Acid:

TNNHLDPFGHIILNSMHKYQ

Intron Amino Acid Position:

187

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.6

0.65

67.9

37.3

Major BPS

72.3

0.55

1.2

80.7

33.2

Major PPT

65.3

0.35

0.9

57.1

37.6

Minor 5ss

32.5

-2

2.9

41.7

37.6

Minor BPS

50.3

1.9

67.58

38.2

Associated Gene:

Gene:

TBX5

Ensembl Gene ID:

ENSAPLG00000006488

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032077

8292141 - 8417622

125482

ENSAPLT00000006752

8292141 - 8328772

36632