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Intron Name: Anas_platyrhynchos_platyrhynchos_16_8324965_8325955_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8324965 - 8325955

Intron Length:

991

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGATC

5'SS Class:

strong_major

3'SS Sequence:

CCCTCCCTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGGTAAC

U12 Branch Point Sequence:

GGGCGGGTAACC

Flanking Amino Acid:

TSPQAAFTQQGMEGIKVFLH

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.2

0.8

30.3

Major BPS

46.7

-0.2

1.4

47.1

44.6

Major PPT

78.8

0.65

0.7

72.3

25.8

Minor 5ss

36.8

-1.5

3.3

51.2

45.7

Minor BPS

35.9

-1

2.6

44.95

43.1

Associated Gene:

Gene:

TBX5

Ensembl Gene ID:

ENSAPLG00000006488

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032077

8292141 - 8417622

125482

ENSAPLT00000006752

8292141 - 8328772

36632