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Intron Name: Anas_platyrhynchos_platyrhynchos_16_8881519_8901411_F

Intron Information:

Intron Rank:

134414

Intron Class:

major

Intron Phase:

Intron Coordinates:

8881519 - 8901411

Intron Length:

19893

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTGAGTCTT

5'SS Class:

strong_major

3'SS Sequence:

GGTCCTCCCACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTTAT

U12 Branch Point Sequence:

CAACCCTTATCT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

0.9

79.6

35.4

Major BPS

66.5

0.41

1.1

57.2

40.1

Major PPT

68.9

0.43

0.9

61.3

35.1

Minor 5ss

34.9

-1.7

3.1

47.1

42.6

Minor BPS

60.2

0.4

1.7

71.86

44.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022241

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030132

8881295 - 8902412

21118