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Intron Name: Anas_platyrhynchos_platyrhynchos_16_8929717_8932832_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8929717 - 8932832

Intron Length:

3116

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGCACA

5'SS Class:

strong_major

3'SS Sequence:

AATGTTCTTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTAAAT

U12 Branch Point Sequence:

GTACCTTTAAAT

Flanking Amino Acid:

GVGSHFQHSRSQGERLLSRE

Intron Amino Acid Position:

2056

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

71.6

40.2

Major BPS

82.3

0.8

0.9

87.6

25.7

Major PPT

78.3

0.64

0.9

74.3

40.5

Minor 5ss

39.2

-1.2

2.8

41.9

44.5

Minor BPS

0.58

1.4

76.87

38.8

Associated Gene:

Gene:

MED13L

Ensembl Gene ID:

ENSAPLG00000008117

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038994

8924916 - 9113868

188953

ENSAPLT00000034575

8924916 - 9119342

194427

ENSAPLT00000008475

8925960 - 9113868

187909