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Intron Name: Anas_platyrhynchos_platyrhynchos_16_8938410_8938845_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8938410 - 8938845

Intron Length:

436

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGAAACC

5'SS Class:

major

3'SS Sequence:

CCCTAATCTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTAAT

U12 Branch Point Sequence:

TCCCCCCTAATC

Flanking Amino Acid:

TCIVNIDLPNRSRRSKLSAR

Intron Amino Acid Position:

1844

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.3

0.53

1.1

65.8

38.4

Major BPS

69.6

0.49

1.1

69.5

Major PPT

71.8

0.49

0.9

61.7

38.7

Minor 5ss

32.7

-2

3.2

43.9

43.5

Minor BPS

56.4

0.18

1.7

64.29

41.6

Associated Gene:

Gene:

MED13L

Ensembl Gene ID:

ENSAPLG00000008117

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034575

8924916 - 9119342

194427

ENSAPLT00000008475

8925960 - 9113868

187909

ENSAPLT00000038994

8924916 - 9113868

188953