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Intron Name: Anas_platyrhynchos_platyrhynchos_16_8939070_8941807_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8939070 - 8941807

Intron Length:

2738

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTTAGTATC

5'SS Class:

strong_major

3'SS Sequence:

TACTTTATTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTGAT

U12 Branch Point Sequence:

GTTTACTTTATT

Flanking Amino Acid:

SIEMTLKNPERPSPIQLYSP

Intron Amino Acid Position:

1770

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.2

0.85

86.4

29.1

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

82.9

0.74

0.8

77.7

Minor 5ss

36.7

-1.5

2.7

46.1

42.1

Minor BPS

63.1

0.49

1.8

82.05

Associated Gene:

Gene:

MED13L

Ensembl Gene ID:

ENSAPLG00000008117

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038994

8924916 - 9113868

188953

ENSAPLT00000034575

8924916 - 9119342

194427

ENSAPLT00000008475

8925960 - 9113868

187909