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Intron Name: Anas_platyrhynchos_platyrhynchos_16_8946720_8948048_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8946720 - 8948048

Intron Length:

1329

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGTCTA

5'SS Class:

strong_major

3'SS Sequence:

CATGCTATTTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTACAT

U12 Branch Point Sequence:

CTGTCATTAATC

Flanking Amino Acid:

LYAQVCRHHLAPYLATLQLD

Intron Amino Acid Position:

1487

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

96.3

1.09

0.7

87.1

Major BPS

82.7

0.81

0.9

89.3

26.1

Major PPT

74.5

0.55

0.9

70.2

39.7

Minor 5ss

37.8

-1.4

49.8

46.4

Minor BPS

65.8

0.47

1.6

71.21

40.5

Associated Gene:

Gene:

MED13L

Ensembl Gene ID:

ENSAPLG00000008117

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008475

8925960 - 9113868

187909

ENSAPLT00000038994

8924916 - 9113868

188953

ENSAPLT00000034575

8924916 - 9119342

194427