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Intron Name: Anas_platyrhynchos_platyrhynchos_16_8949196_8950794_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8949196 - 8950794

Intron Length:

1599

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTATGTGTA

5'SS Class:

strong_major

3'SS Sequence:

CTTCTCTTTAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTAACAT

U12 Branch Point Sequence:

TTCTCTTTAAAG

Flanking Amino Acid:

FHKMAGRGTYGSEESPEPLP

Intron Amino Acid Position:

1348

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

0.9

75.9

33.3

Major BPS

0.52

1.1

77.7

35.3

Major PPT

77.3

0.61

28.2

Minor 5ss

42.5

-0.8

3.1

54.4

45.2

Minor BPS

71.5

0.54

1.4

72.3

40.7

Associated Gene:

Gene:

MED13L

Ensembl Gene ID:

ENSAPLG00000008117

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038994

8924916 - 9113868

188953

ENSAPLT00000034575

8924916 - 9119342

194427

ENSAPLT00000008475

8925960 - 9113868

187909