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Intron Name: Anas_platyrhynchos_platyrhynchos_16_8950975_8951549_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8950975 - 8951549

Intron Length:

575

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAGGGATC

5'SS Class:

major

3'SS Sequence:

CTTTGTCTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAATGAT

U12 Branch Point Sequence:

CCTCGCGGAAAA

Flanking Amino Acid:

ATVHSWPHSNVLDISMLSSQ

Intron Amino Acid Position:

1288

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.5

0.58

1.1

69.6

41.1

Major BPS

0.45

57.8

Major PPT

86.3

0.82

0.8

80.6

31.4

Minor 5ss

35.6

-1.6

3.5

47.8

42.7

Minor BPS

37.5

-0.9

2.3

46.51

42.9

Associated Gene:

Gene:

MED13L

Ensembl Gene ID:

ENSAPLG00000008117

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038994

8924916 - 9113868

188953

ENSAPLT00000034575

8924916 - 9119342

194427

ENSAPLT00000008475

8925960 - 9113868

187909