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Intron Name: Anas_platyrhynchos_platyrhynchos_16_8958483_8961573_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8958483 - 8961573

Intron Length:

3091

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTAGC

5'SS Class:

strong_major

3'SS Sequence:

TCATCATATTTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTCAT

U12 Branch Point Sequence:

ATTTCATCATAT

Flanking Amino Acid:

DGRTAVPYPPTVADLQRMFP

Intron Amino Acid Position:

830

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

0.9

35.3

Major BPS

91.2

1.02

0.7

91.7

20.2

Major PPT

69.1

0.43

0.9

67.2

38.3

Minor 5ss

37.8

-1.4

2.7

46.1

Minor BPS

47.9

-0

2.1

73.8

42.3

Associated Gene:

Gene:

MED13L

Ensembl Gene ID:

ENSAPLG00000008117

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008475

8925960 - 9113868

187909

ENSAPLT00000038994

8924916 - 9113868

188953

ENSAPLT00000034575

8924916 - 9119342

194427