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Intron Name: Anas_platyrhynchos_platyrhynchos_16_8970379_8974679_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8970379 - 8974679

Intron Length:

4301

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGCAAT

5'SS Class:

strong_major

3'SS Sequence:

ATTTATATTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

TAATTCTTAATT

Flanking Amino Acid:

PPTSPEQAVMGESGCSQSSI

Intron Amino Acid Position:

313

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.4

0.76

77.9

38.6

Major BPS

0.92

0.9

86.2

29.1

Major PPT

80.3

0.68

0.9

71.1

43.3

Minor 5ss

40.6

-1

2.9

49.4

46.6

Minor BPS

79.3

85.77

33.9

Associated Gene:

Gene:

MED13L

Ensembl Gene ID:

ENSAPLG00000008117

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008475

8925960 - 9113868

187909

ENSAPLT00000038994

8924916 - 9113868

188953

ENSAPLT00000034575

8924916 - 9119342

194427