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Intron Name: Anas_platyrhynchos_platyrhynchos_16_8974872_8975246_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8974872 - 8975246

Intron Length:

375

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTTTC

5'SS Class:

strong_major

3'SS Sequence:

CATTTCTTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

TATTCTTCCATT

Flanking Amino Acid:

DFPVAVEVIVGGVRMVYPSA

Intron Amino Acid Position:

249

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.9

0.94

0.8

27.9

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

81.2

0.7

0.8

73.6

36.6

Minor 5ss

44.9

-0.5

2.8

58.5

40.5

Minor BPS

54.4

0.22

77.09

39.9

Associated Gene:

Gene:

MED13L

Ensembl Gene ID:

ENSAPLG00000008117

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038994

8924916 - 9113868

188953

ENSAPLT00000034575

8924916 - 9119342

194427

ENSAPLT00000008475

8925960 - 9113868

187909