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Intron Name: Anas_platyrhynchos_platyrhynchos_16_8976862_9016032_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8976862 - 9016032

Intron Length:

39171

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGTGA

5'SS Class:

strong_major

3'SS Sequence:

CCCACATCTCCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTACAT

U12 Branch Point Sequence:

CTCCCCACATCT

Flanking Amino Acid:

YDKDEKPVNKSEHLSCAFTF

Intron Amino Acid Position:

135

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.2

0.93

0.9

75.7

36.7

Major BPS

73.9

0.59

30.2

Major PPT

68.3

0.41

0.9

57.7

37.4

Minor 5ss

36.1

-1.6

3.3

47.1

48.3

Minor BPS

44.2

-0.3

62.67

46.8

Associated Gene:

Gene:

MED13L

Ensembl Gene ID:

ENSAPLG00000008117

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038994

8924916 - 9113868

188953

ENSAPLT00000034575

8924916 - 9119342

194427

ENSAPLT00000008475

8925960 - 9113868

187909