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Intron Name: Anas_platyrhynchos_platyrhynchos_16_9016117_9020831_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9016117 - 9020831

Intron Length:

4715

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAAAT

5'SS Class:

strong_major

3'SS Sequence:

AATTATTTTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

CAGTTATTAATT

Flanking Amino Acid:

LFKAIHNLLERCLMDKNFVR

Intron Amino Acid Position:

107

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.9

1.03

0.7

89.8

22.3

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

75.5

0.57

0.9

66.8

43.8

Minor 5ss

35.1

-1.7

3.1

48.5

47.2

Minor BPS

58.1

0.33

1.6

69.54

41.8

Associated Gene:

Gene:

MED13L

Ensembl Gene ID:

ENSAPLG00000008117

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038994

8924916 - 9113868

188953

ENSAPLT00000034575

8924916 - 9119342

194427

ENSAPLT00000008475

8925960 - 9113868

187909