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Intron Name: Anas_platyrhynchos_platyrhynchos_16_9241003_9241531_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9241003 - 9241531

Intron Length:

529

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGCACAGA

5'SS Class:

major

3'SS Sequence:

TCTGCTATTTTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATAAA

U12 Branch Point Sequence:

TTTTCTGCTATT

Flanking Amino Acid:

CVSCCLQPNKQHLLERFLNR

Intron Amino Acid Position:

141

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.1

0.38

1.1

58.5

42.2

Major BPS

0.3

62.3

30.4

Major PPT

76.6

0.6

0.8

74.2

35.2

Minor 5ss

31.6

-2.1

3.1

40.1

45.6

Minor BPS

46.5

-0.2

2.4

75.66

41.6

Associated Gene:

Gene:

C12orf49

Ensembl Gene ID:

ENSAPLG00000027517

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024083

9238701 - 9244414

5714