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Intron Name: Anas_platyrhynchos_platyrhynchos_16_9243101_9243600_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9243101 - 9243600

Intron Length:

500

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

CCTTTCCCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTGCAT

U12 Branch Point Sequence:

TTTGGTTGCATT

Flanking Amino Acid:

VYFLSSTFKQEERTVRDRNL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.74

1.2

78.8

35.5

Major BPS

57.3

0.18

1.6

71.4

45.1

Major PPT

83.1

0.74

0.7

77.2

24.8

Minor 5ss

30.7

-2.2

3.1

42.2

44.4

Minor BPS

43.4

-0.4

2.3

67.73

44.1

Associated Gene:

Gene:

C12orf49

Ensembl Gene ID:

ENSAPLG00000027517

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024083

9238701 - 9244414

5714