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Intron Name: Anas_platyrhynchos_platyrhynchos_16_9253202_9255704_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9253202 - 9255704

Intron Length:

2503

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCAAA

5'SS Class:

strong_major

3'SS Sequence:

TCATGCCTTTTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTCAT

U12 Branch Point Sequence:

GGTATTTGAACC

Flanking Amino Acid:

YTFSSQQLYNSLIFLKPNLE

Intron Amino Acid Position:

247

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.8

0.87

0.8

79.3

31.1

Major BPS

84.8

0.86

1.1

85.7

34.9

Major PPT

73.4

0.53

0.9

70.2

36.2

Minor 5ss

33.2

-1.9

2.8

46.4

Minor BPS

53.5

0.09

1.5

61.37

37.4

Associated Gene:

Gene:

RNFT2

Ensembl Gene ID:

ENSAPLG00000011870

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039574

9243953 - 9274627

30675

ENSAPLT00000019251

9244435 - 9274627

30193

ENSAPLT00000012380

9243953 - 9274463

30511