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Intron Name: Anas_platyrhynchos_platyrhynchos_16_9271591_9272580_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9271591 - 9272580

Intron Length:

990

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTAGC

5'SS Class:

strong_major

3'SS Sequence:

TTCTTCCTAACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTGAC

U12 Branch Point Sequence:

TTCTTCCTAACA

Flanking Amino Acid:

KALKVLCTPQTYGVRATSQQ

Intron Amino Acid Position:

372

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

95.8

1.08

0.7

85.3

32.2

Major BPS

73.9

0.59

65.3

41.6

Major PPT

81.2

0.7

0.8

77.5

29.9

Minor 5ss

36.1

-1.6

2.7

45.8

42.3

Minor BPS

69.1

0.6

1.7

79.54

36.7

Associated Gene:

Gene:

RNFT2

Ensembl Gene ID:

ENSAPLG00000011870

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039574

9243953 - 9274627

30675

ENSAPLT00000019251

9244435 - 9274627

30193