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Intron Name: Anas_platyrhynchos_platyrhynchos_16_9272683_9274328_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9272683 - 9274328

Intron Length:

1646

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGACCC

5'SS Class:

strong_major

3'SS Sequence:

TTTGTCTCCACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCATGAT

U12 Branch Point Sequence:

TTTGTCTCCACA

Flanking Amino Acid:

FREPLILMCQHVFCEECLCL

Intron Amino Acid Position:

406

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.9

0.92

0.9

72.5

37.3

Major BPS

72.1

0.55

1.1

44.2

Major PPT

0.72

0.8

76.7

32.1

Minor 5ss

33.2

-1.9

3.1

43.3

43.8

Minor BPS

50.3

2.1

70.77

41.8

Associated Gene:

Gene:

RNFT2

Ensembl Gene ID:

ENSAPLG00000011870

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039574

9243953 - 9274627

30675

ENSAPLT00000019251

9244435 - 9274627

30193