Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_16_9329951_9330687_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

9329951 - 9330687

Intron Length:

737

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATTTATC

5'SS Class:

strong_major

3'SS Sequence:

CACTCCAGGGCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CCATGAT

U12 Branch Point Sequence:

GATGCAGCAACC

Flanking Amino Acid:

FGWLLNEPNQGPGCRQTCFQ

Intron Amino Acid Position:

408

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

79.8

33.2

Major BPS

59.7

0.24

1.2

51.3

42.7

Major PPT

55.3

0.12

1.1

50.6

37.6

Minor 5ss

46.5

-0.4

2.5

63.1

41.4

Minor BPS

41.2

-0.6

2.3

54.03

43.2

Associated Gene:

Gene:

FBXW8

Ensembl Gene ID:

ENSAPLG00000012002

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012512

9294734 - 9330777

36044