Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_16_9358582_9361391_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9358582 - 9361391

Intron Length:

2810

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGCAGC

5'SS Class:

major

3'SS Sequence:

TCTTGTTGTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

TATTAATGAACC

Flanking Amino Acid:

GKVWRECFRLRWPSLLKYYS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.8

0.59

63.1

43.4

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

76.5

0.6

0.9

72.9

37.4

Minor 5ss

32.9

-2

3.1

42.5

44.6

Minor BPS

54.8

0.13

1.9

71.56

38.4

Associated Gene:

Gene:

FBXO21

Ensembl Gene ID:

ENSAPLG00000012257

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012785

9341271 - 9361600

20330