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Intron Name: Anas_platyrhynchos_platyrhynchos_16_9378415_9380914_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

9378415 - 9380914

Intron Length:

2500

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

ATG|GCAGAGGAG

5'SS Class:

major

3'SS Sequence:

CAGGAGCTACAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTGTAAT

U12 Branch Point Sequence:

AATGCCTGATGT

Flanking Amino Acid:

TGAGGCSRGMVRFNSVSSYS

Intron Amino Acid Position:

390

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.5

0.32

1.2

52.7

41.6

Major BPS

72.1

0.55

1.2

73.3

39.1

Major PPT

-0.2

1.1

34.8

39.7

Minor 5ss

16.3

-3.9

4.1

40.2

Minor BPS

-0.2

2.1

64.44

45.5

Associated Gene:

Gene:

NOS1

Ensembl Gene ID:

ENSAPLG00000012700

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047618

9369794 - 9386924

17131

ENSAPLT00000046283

9369794 - 9386253

16460

ENSAPLT00000026476

9369794 - 9386300

16507

ENSAPLT00000025451

9369794 - 9389420

19627