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Intron Name: Anas_platyrhynchos_platyrhynchos_16_9378425_9380541_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9378425 - 9380541

Intron Length:

2117

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGAGCA

5'SS Class:

strong_major

3'SS Sequence:

TTGCTGTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTGTAAT

U12 Branch Point Sequence:

AATGCCTGATGT

Flanking Amino Acid:

KNPNSNLEERKSYKVRFNSV

Intron Amino Acid Position:

847

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

71.6

31.9

Major BPS

72.1

0.55

1.2

73.3

39.1

Major PPT

82.1

0.72

0.9

76.5

37.5

Minor 5ss

32.4

-2

3.3

39.8

Minor BPS

-0.2

2.1

64.44

45.5

Associated Gene:

Gene:

NOS1

Ensembl Gene ID:

ENSAPLG00000012700

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013311

9371593 - 9402728

31136