Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_16_9459389_9460113_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9459389 - 9460113

Intron Length:

725

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGCTGG

5'SS Class:

major

3'SS Sequence:

TTTCTCCCCGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CAGCCAC

U12 Branch Point Sequence:

CTGGCCCCAGCC

Flanking Amino Acid:

RRDLGNSIKHRFSTKYWMSQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.2

0.69

62.3

44.7

Major BPS

42.9

-0.4

1.2

45.5

37.5

Major PPT

82.5

0.73

0.7

77.7

24.2

Minor 5ss

49.3

-0

2.5

64.5

46.9

Minor BPS

41.5

-0.6

2.1

51.08

45.7

Associated Gene:

Gene:

KSR2

Ensembl Gene ID:

ENSAPLG00000004721

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004858

9434084 - 9461790

27707