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Intron Name: Anas_platyrhynchos_platyrhynchos_16_9480630_9481872_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9480630 - 9481872

Intron Length:

1243

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACGGGG

5'SS Class:

major

3'SS Sequence:

TGCTGCTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTCAC

U12 Branch Point Sequence:

TTATTGTTCACT

Flanking Amino Acid:

GQQPAASAPARPQDGSKPAE

Intron Amino Acid Position:

132

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.4

0.55

1.2

58.7

46.2

Major BPS

74.9

0.62

1.1

77.4

37.4

Major PPT

80.2

0.68

0.9

76.7

37.5

Minor 5ss

34.2

-1.8

3.6

46.8

48.5

Minor BPS

52.2

0.15

2.4

42.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005917

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006218

9475647 - 9485358

9712