Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_16_9492456_9497193_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9492456 - 9497193

Intron Length:

4738

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGGATC

5'SS Class:

strong_major

3'SS Sequence:

TTTTCCTTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGATAAT

U12 Branch Point Sequence:

TCCCGCTCTATT

Flanking Amino Acid:

IRNISYSDKEFTIKPLDKKI

Intron Amino Acid Position:

171

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.2

0.8

30.3

Major BPS

63.8

0.34

1.2

64.1

39.8

Major PPT

0.99

0.5

92.6

17.2

Minor 5ss

36.8

-1.5

3.3

51.2

45.7

Minor BPS

-0.5

2.1

57.26

45.6

Associated Gene:

Gene:

NF2

Ensembl Gene ID:

ENSAPLG00000006504

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035755

9487080 - 9515859

28780

ENSAPLT00000006834

9487080 - 9515859

28780