Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_16_9498735_9500762_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9498735 - 9500762

Intron Length:

2028

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGAGAC

5'SS Class:

strong_major

3'SS Sequence:

TCCTTTCTCCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCCC

U12 Branch Point Sequence:

TCTTCCTTTCTC

Flanking Amino Acid:

QAREEKARKQMERQRLAREK

Intron Amino Acid Position:

234

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.6

0.86

0.8

74.6

28.6

Major BPS

35.6

-0.9

4.2

77.4

37.4

Major PPT

0.65

0.7

72.8

32.1

Minor 5ss

25.3

-2.8

3.2

31.7

42.9

Minor BPS

44.8

-0.4

3.6

70.08

Associated Gene:

Gene:

NF2

Ensembl Gene ID:

ENSAPLG00000006504

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035755

9487080 - 9515859

28780

ENSAPLT00000006834

9487080 - 9515859

28780